Key Changes from the 55th GST Council Meeting: ITC, Appeals, and Filing Compliance
The 55th GST Council Meeting produced a series of targeted recommendations covering Input Tax Credit eligibility, the Input Services Distributor mechanism, pre-deposit requirements for penalty appeals, GSTR-9C late fee waivers, and reporting obligations for online service suppliers. These recommendations, once enacted through notifications and circulars, will have direct compliance implications for a wide range of businesses. This summary covers the key changes and their practical significance under India’s GST and indirect tax advisory framework.
ITC-Related Changes: ECOs, Ex-Works Contracts, and ISD Mechanism
ITC Reversal Exemption for Electronic Commerce Operators
The GST Council has recommended that electronic commerce operators (ECOs) are not required to proportionally reverse ITC under Section 17(1) or Section 17(2) of the CGST Act for supplies on which they are obligated to pay tax under Section 9(5). This is a significant clarification that reduces the compliance burden on ECOs operating in the online marketplace space. Businesses operating as ECOs that need to assess the implications of this change on their ITC positions and return filings should engage structured GST advisory and compliance support.
ITC Eligibility on Supply of Goods on Ex-Works Basis
The GST Council recommended clarifying that in an ex-works contract — where goods are handed over by the supplier to the recipient or transporter at the supplier’s business premises, and ownership transfers to the recipient at that point — the goods are deemed to have been “received” by the recipient under Section 16(2)(b) of the CGST Act. Accordingly, the recipient may claim GST refund and ITC claims on such goods, subject to satisfaction of the conditions specified in Sections 16 and 17 of the CGST Act. This clarification is particularly relevant for manufacturing and trading businesses that deal in ex-works supply arrangements.
Amendment to the Input Services Distributor (ISD) Mechanism
The provisions governing the ISD mechanism are proposed to be amended to include inter-state transactions that are subject to reverse charge within the ISD framework. The ISD mechanism allows a registered entity to distribute the credit of GST paid on common input services to its branches or units. Bringing inter-state reverse charge transactions into this framework is intended to streamline credit distribution and reduce operational friction for multi-location entities. These changes are proposed to be effective from 1st April 2025.
Appeals, Registration, and Procedural Changes
Reduced Pre-Deposit for Penalty-Only GST Appeals
The pre-deposit amounts for filing appeals under Section 107(6) and Section 112(8) of the CGST Act — in cases involving only a demand of penalty without any demand of tax — are proposed to be reduced to 10% of the penalty amount. This is a meaningful relief for taxpayers contesting penalty-only orders, as the pre-deposit requirement had previously acted as a financial barrier to pursuing appeals. Businesses dealing with penalty disputes should review their appeal strategy in light of this change and may benefit from GST appeal and litigation support to assess their options.
Temporary Identification Number (TIN) for Unregistered Persons
Persons who are not required to obtain GST registration under the CGST Act but are liable to make any payment under GST provisions can be granted a Temporary Identification Number (TIN) by tax officers under Rule 87(4) of the CGST Rules. The GST Council has noted that implementing this requires an amendment to the registration-related provisions and the relevant forms. This change is aimed at facilitating payment compliance for entities that fall outside the mandatory registration threshold but still have occasional GST payment obligations.
Filing and Reporting Compliance: GSTR-9C Late Fee and B2C Supplies
Late Fee Waiver for Delayed Filing of Form GSTR-9C (FY 2017-18 to 2022-23)
The GST Council recommended issuing a circular to clarify that late fees under Section 47(2) of the CGST Act apply to delays in filing the complete annual return under Section 44, which includes both Form GSTR-9 (Annual Return) and Form GSTR-9C (Reconciliation Statement) where applicable.
For annual returns covering FY 2017-18 to FY 2022-23, the GST Council also recommended a notification under Section 128 of the CGST Act to waive the late fee for delayed filing of Form GSTR-9C. The waiver applies to the portion of the late fee exceeding the amount payable up to the date of filing of Form GSTR-9 for the respective year, provided that Form GSTR-9C is filed on or before 31st March 2025. This waiver offers a valuable compliance window for businesses that had deferred filing of the reconciliation statement for earlier financial years.
Mandatory State Capture for B2C Online Service Supplies
The GST Council has recommended issuing a circular to clarify that for the supply of online services, including online money gaming and OIDAR (Online Information and Database Access or Retrieval) services, to unregistered recipients, the supplier is required to mandatorily record the name of the recipient’s state on the tax invoice. The recorded state name will be deemed to be the “address on record” of the recipient for the purposes of Section 12(2)(b) of the IGST Act, read with the proviso to Rule 46(f) of the CGST Rules. Businesses offering online services to consumers across India should review their invoicing practices in light of this clarification to ensure accurate place-of-supply determination and return reporting.
Additional Resources
For further reading on related GST compliance and ITC topics, the following MBG insights may be useful:





